Chen Shen and Yaneer Bar-Yam, Massive testing can stop the coronavirus outbreak, New England Complex Systems Institute (March 6, 2020)
In order to stop an outbreak transmission has to be stopped. A key strategy is to identify individuals who have the disease and isolate them so that others are not infected. If the test is not perfect we might isolate additional people who are not infected—these are false positives. This leads to additional social cost but will still stop the outbreak. On the other hand, we can also allow a number of false negatives. As long as the ratio of false negatives is small enough, there will be fewer new cases over time and the outbreak will die out exponentially. The greater the number of individuals each sick individual infects (infection rate or reproduction rate without testing), the smaller the allowable false negative rate.
The more specific we can be about identifying potential cases, the better, because fewer people have to be isolated. On the other hand, the fewer the cases we miss even if we isolate more people, the more rapid the outbreak disappears, and the fewer people get sick and die.
How do the various ways we stop outbreaks relate to this general framework? Here are a few examples:
More generally, we see that any way of determining the individuals to be isolated, using various tests including symptoms, geographic location, or molecular tests, that have the ability to identify those who are infected, even if there are false positives, and with few enough false negatives, can be used to stop a contagion.
In addition to performing the testing, a key question is how early can we identify if someone is a member of the group that should be isolated and how does that affect the number of people they infect. If they are identified before they become contagious, or there is only a small window of time they are contagious, that can be sufficient in preventing infections to be effective at stopping the outbreak. The fraction of time they are contagious acts in a similar way to false negatives, it contributes to the number of individuals that are infected and reduces the effectiveness of the test for stopping the outbreak. This makes early and rapid application of the test, no matter what form it takes, symptomatic, geographic, or molecular, an essential part of whether the test is effective in stopping the outbreak, and how many people become sick and die.
In the case of COVID-19, the Coronavirus outbreak starting in Wuhan, there is a specific DNA test using a nasal or throat swab, that can provide rapid enough identification of cases, to reduce dramatically the contagion rate if those who test positive are isolated. The tests take several days to provide results. More rapid ones are in development.
Early in the outbreak, there was a severe limit to the number of tests that could be done, and the need for community based isolation was an imperative, and was used in China to remarkable success augmenting, particularly in Wuhan, a massive more traditional contact tracing effort (670,000 people) [2]. Subsequently in South Korea, while a lockdown was implemented [3], so was much larger scale testing, including convenient drive by locations [4]. Very recently there is indication that the outbreak in South Korea is under control [5].
At this time in many places in the world, including the US, there are insufficient tests to achieve widespread testing. This limits our ability to use this approach. Still, it is possible in principle for the test to be produced rapidly and cheaply and then applied massively to identify cases limiting the need to use other approaches such as lockdowns. Once a large number of tests are available, massive specific testing can achieve the desired outcome of stopping the outbreak.
What should be done? Slowing or stopping the Coronavirus outbreak can take a multi-pronged approach. Individuals, families and communities should take precautions to avoid contacts and limit their and others likelihood of becoming infected. At the same time medical authorities should ramp up testing with minimal qualifications and ready access across geographical locations. Where it is possible, corporations or NGOs may also provide test services in convenient locations, perhaps even door to door, as was done toward the tail end of the outbreak in China [6], for rapid identification of cases.
Chen Shen and Yaneer Bar-Yam, Massive testing can stop the coronavirus outbreak, New England Complex Systems Institute (March 6, 2020)
In order to stop an outbreak transmission has to be stopped. A key strategy is to identify individuals who have the disease and isolate them so that others are not infected. If the test is not perfect we might isolate additional people who are not infected—these are false positives. This leads to additional social cost but will still stop the outbreak. On the other hand, we can also allow a number of false negatives. As long as the ratio of false negatives is small enough, there will be fewer new cases over time and the outbreak will die out exponentially. The greater the number of individuals each sick individual infects (infection rate or reproduction rate without testing), the smaller the allowable false negative rate.
The more specific we can be about identifying potential cases, the better, because fewer people have to be isolated. On the other hand, the fewer the cases we miss even if we isolate more people, the more rapid the outbreak disappears, and the fewer people get sick and die.
How do the various ways we stop outbreaks relate to this general framework? Here are a few examples:
More generally, we see that any way of determining the individuals to be isolated, using various tests including symptoms, geographic location, or molecular tests, that have the ability to identify those who are infected, even if there are false positives, and with few enough false negatives, can be used to stop a contagion.
In addition to performing the testing, a key question is how early can we identify if someone is a member of the group that should be isolated and how does that affect the number of people they infect. If they are identified before they become contagious, or there is only a small window of time they are contagious, that can be sufficient in preventing infections to be effective at stopping the outbreak. The fraction of time they are contagious acts in a similar way to false negatives, it contributes to the number of individuals that are infected and reduces the effectiveness of the test for stopping the outbreak. This makes early and rapid application of the test, no matter what form it takes, symptomatic, geographic, or molecular, an essential part of whether the test is effective in stopping the outbreak, and how many people become sick and die.
In the case of COVID-19, the Coronavirus outbreak starting in Wuhan, there is a specific DNA test using a nasal or throat swab, that can provide rapid enough identification of cases, to reduce dramatically the contagion rate if those who test positive are isolated. The tests take several days to provide results. More rapid ones are in development.
Early in the outbreak, there was a severe limit to the number of tests that could be done, and the need for community based isolation was an imperative, and was used in China to remarkable success augmenting, particularly in Wuhan, a massive more traditional contact tracing effort (670,000 people) [2]. Subsequently in South Korea, while a lockdown was implemented [3], so was much larger scale testing, including convenient drive by locations [4]. Very recently there is indication that the outbreak in South Korea is under control [5].
At this time in many places in the world, including the US, there are insufficient tests to achieve widespread testing. This limits our ability to use this approach. Still, it is possible in principle for the test to be produced rapidly and cheaply and then applied massively to identify cases limiting the need to use other approaches such as lockdowns. Once a large number of tests are available, massive specific testing can achieve the desired outcome of stopping the outbreak.
What should be done? Slowing or stopping the Coronavirus outbreak can take a multi-pronged approach. Individuals, families and communities should take precautions to avoid contacts and limit their and others likelihood of becoming infected. At the same time medical authorities should ramp up testing with minimal qualifications and ready access across geographical locations. Where it is possible, corporations or NGOs may also provide test services in convenient locations, perhaps even door to door, as was done toward the tail end of the outbreak in China [6], for rapid identification of cases.